Browse of TCMCG066C14919 protein

CDS

Accession Number	TCMCG066C14919
gbkey	CDS
Protein Id	XP_034592234.1
Location	join(5363995..5364018,5364611..5364684,5364801..5364940,5365056..5365142,5365240..5365327,5365423..5365506,5365965..5366042,5366137..5366216,5367053..5367131,5367420..5367728,5367810..5367896,5368842..5369073,5370176..5370382,5371122..5372426,5372529..5372781,5372889..5372973,5373051..5373138,5373445..5373523,5373964..5374262,5375831..5376857,5376940..5377317,5377553..5378190)
Gene	LOC117854065
GeneID	117854065
Organism	Setaria viridis

Protein

Length	1906aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA633601
db_source	XM_034736343.1
Definition	mediator of RNA polymerase II transcription subunit 13 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category	I
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACCAACATTTTCAAAATAGTGGACCTCCAAACAGTTTCATGGTTTCAGTTTCTTCCTATTGAACCAGATGCAAGTACAACTAAAGAGAGAAGTTCAAAGGCTGAGCAGAAAGATGCTCTTAATAACGTTGTGCTGTCGGCATATCTTCACTTACAAAGTGAAGGTTTCCTAAGTACCTGGACAAATTCCTTTGTTGGTCCATGGGATCCATCTCAAGGAGAGCATAACCCTGATGAGAAGATCAAGCTCTGGTTGTTTCTTCCTGGCCGCCACTCATCGGTATCTGAAATGGCCCAAACTGCTGTAAACAAATTAAGAGTTGCTTCAAATGGTTTATGGGTAGCCCCAGGCAACTCAGAAGAGGTAGCAGCTGCACTGTCTCAGGCCTTAAGAAATTCTTTAGAAAGATCACTAAGAGGGCTTTCGTATGCAAGGTTTGGTGATGTTTTTACAAAATACAACCCCCCTACAAGAAATCAAAACAGCTTTAGGCGAGCACAGCCTACAGTGGAGTTTGTCTTTGCTGCCACCGAGGAAGCAATATTTGTGCACGTTCTCATATCTGCTAGGTACATGCGGAACCTTTGTAGTGATGACATAGAGAAAGTTCTCACGCATTCTCCTTGCTCTGTTGGTGAAGGTCTTCCAGTTGTTGTTGCTCCTAGTGGAATGCTTGGTAGGCTTGTCGGCTGTTGTCCAAGTGATCTTGTCAGACAAGTATATCCAAGCAAGTCCTCGGCACCTAATTTGCCAGGTTTTACTCAACCTACTGTATGTCAGCTGAGAGGCCAAAGTTACTACGTTGAAGTTGCACTTGGCTTCCCTGCTGCTTCAGCTGACAGAGTTTCTGAATCAGAACAGATTCAAATAAAAAAGGAAATGGATTCAGTGAAGGACTCTCAGCTGGGTGCTGACGGACAGCGAAAGGTAGAATCACCTGATAGCCTTCCAGTTCTTGAGAGGACATTTATTTACCCACCAGAGGCTGTTTTGGTACCTATGGTCCATCAAGCATTTGTTCGTTTTTCTAGCAAAAGAATGTGTTTACAGGGCTCTCTGGGAGGTTCATTATGGGAGGCATGGCCATTCTGGAATTTTACTCCATCTTCTTACTTTCAGAACAGCTCATTCCTGGGATCTTCTCGTGGACTTGGAGTGAATTCTAATTTTCTGAGACTAAGAAGAAAAAAGAACAAGTGCAACAACATGGCTAGTAGTGTTAGTAGTGTGAGTAGCACTTCTGATGGAAGTGAGCATGCAGTTGCTACTGAAGGTGATCTTTTAGCTGATGCTGACTCTATGGTACGCCGTCAGTCCGATACGCCTTCCAACAATGAGAATGCTGGCAGCAAGACGGTATCTAAGCGGCCCCGTTCTGAAATAACCGAAGTTTCTTCTCATGCTGGCAAAGATGTTAGTGAAAACGTACAAGGTGCAAATGGTCAAGTCGGACGCCCTTGGGGCTGGGATGATGAGGGTGTTGTGATGGACATCAATATACTGCTCTCAGAATTTGGAGATTTTAGTGACTTCTTTCAAGAAGAGGAGTTAGATTTTGGTGAGCCTCCAGGTACTGCTGAATCACACGCTCTCGTAATTCCTGCTTCCGACTGTGGAGATGTCACATTCACAGATAGTCCGTCCACAGCAATGGATATCCCTGAACAAAGACTTTCTCCTGTTGGTTTCACATCTTTGGATGCATTTGACCAACAAATTATGGCCCCTGCTCAGGATGCCGTTTCTAAAGTTCAAGAACCTCAGAAAGATGTTGCAACTCCTGCACAATCCCAGTCTTTAGTTTTATCGTCTGGAAGATTTGACTATCTTACCAAAGCTGAAGCAATGCTCACATTCGCTCCAGAATATGCAGCTGTTGAAGTTTCTGTTGCTGAGGTGCCAGCATCATTGTTCACAAATCCGTACTTGCCCAGATCAAAGAAACCAGGCAGTTCTAGTTTTAGCTCAAGAGTTTATTCATATGATGTTACACAAAGTTCTCAAATCGAGTCTGCAGGAGATAAGCCTGAGAAGCCTTCTAAATCTGGTAATCCTTTACGTGATGTTGATTCATCAAACTTATACACACTTGTCCAAGGTGGGAAGAAAGAGAGTGACAAGAGCTTAAACAGTACCGACATACAGCCAACTAAGGGAGGAACATCACCACCTATTTCTGGTGTGACTTCATTTAGTTCTTCTCTTGTTTCACAAAAGAAGAGTGACAGCATGTTTAATGCTGGGTATTTTTTGCTATCTATGAAGACTGCTCTTGCAACTGAAATTGAATGCATCACATTCCAGGCTGCCATGTGCAGAATTAGGCATACCCTGTTGTCTTTGAGAAGCAAAGCGTCTGCTGGTTTTAATGGCGCCATGTCCAGTTTTATGCAGACAGATGTCAGCAATAAATCAGATCTCACCCCCAAGTATGACATAAGAAAAAAAGAAGTTATGCCCATAAGGCTATCTAGTGATGTTGAGCATGAAACACATGACAGATCCTTAATGGAAAGTGTGGGAGTTTGGAGGCCGGTTGTTACTCCTAAAGGGGCAAACTCTCTTGAGTCTTTGTCTGCTAAAACATTAACTGGTGCAAGCCCAAGTCAGTCTACGCAAAGGCAGCCTGTTGTGGATCTTCTCTTTGCCATGGCGCTGCTTGTTCAACAATCTACTTCATTTGTTGATATTTCACTTGATATGGATGATGGGGATGGTTCCTTTTTCTGGCTTTCTCTGGATGAGCAAAAGAGACGTGGGTTTTCTTGTGATCCTTCGATGGTTCATGCTGGCTGTGGTGGTCTATTAGGAACATGCCATTCGAAGGATTGTGCTGGTGTTGATTTAGTTGATCCACTTTATGCTGAGGTTTCAGAGTCATCCATGTTTAGCTTGTTGCAGTCAGATATAAGGACAGCTCTCAAAACTGCCTTTGCAAACATGGATGGCCCATTATCTGTGATTGATTGGTGCAGGGGCCGAAGCAATCCAGCTGAGTCTGCAGCTACGGGAGATGCATACTCTTTTCAGTACTCCACCGGTGATATCCGGGAGCCATCAAACACTTTGTCCATTGGTGGAGATTCAATGAGCCCACCTCAGCCGACCAGTAGTAACCGAGGCACTTCAGAGCTGGAGCATCAAAAGGGATATCACCGTGTCAGACCAACCATCGCCGTCCTCCCTTCACCTTCTATGCTTGTTGGTTACCAGGATGATTGGTTGAAAGTCTCGGTGAATAGCCTTAAGACTTGGGAGAAAGCTCCTTTTGAACCTTATGCCTCACCCAAGCCTGTTACTTATTATGCACTTTGCCCCGATATTGATATGCTTACTTCAGCGGCCACTGATTTTTTCTTGCAGCTTGGAACAGTTTATGAAGTTTGCAAACTGGGAACTCATTCACCACAAAACAGTGGAGGACAAATGGAACTGTCTCCTGGAAAATATTTGCCTTCAGGACTTGTTCTAGTTGAGTGTCCTGATCAGGTGAAGAAGGTTGGCAGCAGTCACTTAAGTCCCATCAGTTCGATATCTGACTATCTTCAAGCTTTTTCAAAACATTGGAGTGTGAAAAGCTTTCTAACATCTGTGTCGAGGATACTTAGGGATATAAAGCTCACTTCAAGCATCTCTACAAATCAAAAAGAGAGCAGTAGTGGACCTTGCACTGTAATTTATGTAGTCTGCCCGTTTCCAGATCCTGGTGCAATTCTACAGACACTAGTAGAATGTTCTGTTTCTCTTGGATACGTTATTTCATCCCCAGAGAGGGAAAGGAAATCACTGTATTTCCAGGTTGCCAAAGCACAAAACAGCAGTGCTTGTGCAGATGAAGCATCAGCATCAAATGTTGTAATGCTATCTGGGTTCAGTATACCTAAGCTCGTATTGCAGATTGTTACGATTGAAACTGTACTGAGAATTGATAAGCCAAGCAATGAGCTTGCTGTTTTGAAGGATATAGCATTTACAGTGTACAACAAGGCGCGGCGAATCCCACGAGCTGTTTCCACAAACGACATGTTTCAGTCACCTACTTATTTGGGTAGATCTCAGTCCACAATGATGCATGTTACATCGCCTGCTCCTACCCTTTGGAAAGAATGTTTAGTTCCTCGGATGTCTGGACCAACTCTCTCGAGAGAAACAGATTTTGATGCACCCATGAGGTCAGCAACATGGGATAACTCATGGCAGCCTGCTCGTGCAGGACTGCTGGACCCAAGTAAGATCCCGGATTTATGTGCACAAGATGATAGGAAGTATGCCTTTGAGCCACTTTTCATACTAGCAGACCCTGGATCTGTCGATCCTAATGCTTCAATGGAATCGTCAAAATCTGGAGCCGACGCCAGTGGCAGCGGGGTTTATGCCTCTGATAGTGGTGCGAGCCCTCTACTCGATGGATCTGAGTGTGACAGAGCAGCAAGTCTCCATTGTTGTTATGGTTGGACTGAGGACTGGCGTTGGTTAATATGCATCTGGACAGATGCTAGAGGAGAGTTATTGGATAGCCTAATATTTCCTTTTGGTGGTATTAGTAGCCGCCAAGACACTAAAGTTCTCCAAAGTCTTTTCATTCAAATTCTGCAGCAGGGTTGTCAAATAATGTCGTCATCTCCTGAGGCTAGCAACATGAGACCAAGAGATGTAATGATAACTCGCATTGGAGGTTTTCTTGAACTTGAAATTCAAGAATGGCAAAAGGCAATATATTCTTTTGGTGGTAATGAAGTCAAGAAGTGGCCTGTGCAGTTACGGCGATCCATACCTGAGGGTATTCCATCTAATTCGAATGGTCCTGCACTCCAGCAGCAAGACATGACCTTAATTCAAGATAGAAACATGCCTTCCTCACCAAATCCTTTGTACAGTCCTCATTCAAAATCAAGTTTCATGAAAGGTGGACTTGGACAATCAGGCAACAAAAAACAGATCCTAGTGGAACAAACTGGGATGGACAATTCAAGGGGTTCGCTGCACTTAGTTCGCAGCATCAGTTTGGTTGCAGTTTCCCAAGATCATTCATTGCATCTCACATGTCAAGCGGATCTTTTGACCAGGCTTGCTCCTGGTGAAGGGAATCAAGGTAGCAGTGGTCCTTTGAGTTACTTGGAAGGCTTCACTCCAGTGAAGTCCATTGGGTCAATGCCAGCATCACACTCTTATCTCCTAGTTCCTTCTCCAAGTATGAGATACCTTTCTCCAGCAACATTACAGCTCCCGACATGCCTGACATCAGAATCTCCACCCCTTGCCCATCTACTGCACAGCAAAGGGACCGCAATTCCCTTGGCAATGGGCTATGTCGTCTCCAAAGCCGTCCCGCCCGTAAGAAGGGACTCTGCACAGCTTACCAGGGAGGATCGGCCCTCTGTTCTCTCGGTTAGCATCATTGATCACTATGGGGGCAGCATTGGCATGGTTCAAGAAAAGATGAGCCGAGGTGCTGGTGGCAGCAACATGAGCAAACAGGCAAGGAACTTCACTCAGGAGACATCGACTAGAGACTATGAGATGGAGATGCATAGTGTGCTGGAAACCGTTGCCGCCGAGCTTCACTCCCTTTCTTGGTTGACTGTTAGCCCGGTCTACACAGAAAGGCGTACGGCTCTGCCCTTCCACTGTGACATGGTCCTGAGGTTGAGGCGGCTTCTACACTACGCCGATCGGCATCTAACTCAACCAGCAGAGAAGGGAGAGACGGCTTAG

Protein:   MWTNIFKIVDLQTVSWFQFLPIEPDASTTKERSSKAEQKDALNNVVLSAYLHLQSEGFLSTWTNSFVGPWDPSQGEHNPDEKIKLWLFLPGRHSSVSEMAQTAVNKLRVASNGLWVAPGNSEEVAAALSQALRNSLERSLRGLSYARFGDVFTKYNPPTRNQNSFRRAQPTVEFVFAATEEAIFVHVLISARYMRNLCSDDIEKVLTHSPCSVGEGLPVVVAPSGMLGRLVGCCPSDLVRQVYPSKSSAPNLPGFTQPTVCQLRGQSYYVEVALGFPAASADRVSESEQIQIKKEMDSVKDSQLGADGQRKVESPDSLPVLERTFIYPPEAVLVPMVHQAFVRFSSKRMCLQGSLGGSLWEAWPFWNFTPSSYFQNSSFLGSSRGLGVNSNFLRLRRKKNKCNNMASSVSSVSSTSDGSEHAVATEGDLLADADSMVRRQSDTPSNNENAGSKTVSKRPRSEITEVSSHAGKDVSENVQGANGQVGRPWGWDDEGVVMDINILLSEFGDFSDFFQEEELDFGEPPGTAESHALVIPASDCGDVTFTDSPSTAMDIPEQRLSPVGFTSLDAFDQQIMAPAQDAVSKVQEPQKDVATPAQSQSLVLSSGRFDYLTKAEAMLTFAPEYAAVEVSVAEVPASLFTNPYLPRSKKPGSSSFSSRVYSYDVTQSSQIESAGDKPEKPSKSGNPLRDVDSSNLYTLVQGGKKESDKSLNSTDIQPTKGGTSPPISGVTSFSSSLVSQKKSDSMFNAGYFLLSMKTALATEIECITFQAAMCRIRHTLLSLRSKASAGFNGAMSSFMQTDVSNKSDLTPKYDIRKKEVMPIRLSSDVEHETHDRSLMESVGVWRPVVTPKGANSLESLSAKTLTGASPSQSTQRQPVVDLLFAMALLVQQSTSFVDISLDMDDGDGSFFWLSLDEQKRRGFSCDPSMVHAGCGGLLGTCHSKDCAGVDLVDPLYAEVSESSMFSLLQSDIRTALKTAFANMDGPLSVIDWCRGRSNPAESAATGDAYSFQYSTGDIREPSNTLSIGGDSMSPPQPTSSNRGTSELEHQKGYHRVRPTIAVLPSPSMLVGYQDDWLKVSVNSLKTWEKAPFEPYASPKPVTYYALCPDIDMLTSAATDFFLQLGTVYEVCKLGTHSPQNSGGQMELSPGKYLPSGLVLVECPDQVKKVGSSHLSPISSISDYLQAFSKHWSVKSFLTSVSRILRDIKLTSSISTNQKESSSGPCTVIYVVCPFPDPGAILQTLVECSVSLGYVISSPERERKSLYFQVAKAQNSSACADEASASNVVMLSGFSIPKLVLQIVTIETVLRIDKPSNELAVLKDIAFTVYNKARRIPRAVSTNDMFQSPTYLGRSQSTMMHVTSPAPTLWKECLVPRMSGPTLSRETDFDAPMRSATWDNSWQPARAGLLDPSKIPDLCAQDDRKYAFEPLFILADPGSVDPNASMESSKSGADASGSGVYASDSGASPLLDGSECDRAASLHCCYGWTEDWRWLICIWTDARGELLDSLIFPFGGISSRQDTKVLQSLFIQILQQGCQIMSSSPEASNMRPRDVMITRIGGFLELEIQEWQKAIYSFGGNEVKKWPVQLRRSIPEGIPSNSNGPALQQQDMTLIQDRNMPSSPNPLYSPHSKSSFMKGGLGQSGNKKQILVEQTGMDNSRGSLHLVRSISLVAVSQDHSLHLTCQADLLTRLAPGEGNQGSSGPLSYLEGFTPVKSIGSMPASHSYLLVPSPSMRYLSPATLQLPTCLTSESPPLAHLLHSKGTAIPLAMGYVVSKAVPPVRRDSAQLTREDRPSVLSVSIIDHYGGSIGMVQEKMSRGAGGSNMSKQARNFTQETSTRDYEMEMHSVLETVAAELHSLSWLTVSPVYTERRTALPFHCDMVLRLRRLLHYADRHLTQPAEKGETA